Information for 6-GGCCCCGCCCACA (Motif 2)

A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
Reverse Opposite:
C A G T T A C G A C G T C T A G C A T G T A C G T A G C A C T G A C T G C T A G A C T G A G T C T A G C
p-value:1e-16
log p-value:-3.697e+01
Information Content per bp:1.749
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif384.0
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets52.0 +/- 25.5bp
Average Position of motif in Background46.7 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGCCCCGCCCACA
GGCCCCGCCCCC-
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGCCCACA
-GCTCCGCCCMCY
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGCCCACA
-GCCMCGCCCMCY
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCGCCCACA
NAGCCCCGCCCCCN
 A C G T A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCCACA
-GCCACRCCCACY
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCCACA
-GCCCCGCCCCC-
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGCCCCGCCCACA-
NRGCCCCRCCCHBNN
 A C G T A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGCCCCGCCCACA
-GCCCCGCCCC--
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGCCCCGCCCACA--
TAAGCCACGCCCCCTTT
 A C G T A C G T A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGCCCACA
-GCCCCACCCA--
 A T C G A C T G A G T C A G T C G T A C G T A C A T C G A G T C G T A C A G T C G T C A A T G C G T C A
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T