Information for 8-GTGACCACTAGGNGGC (Motif 17)

T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
Reverse Opposite:
C T A G A T G C G A T C G T C A A G T C G A T C G A C T G T C A A T C G G C A T A C T G A T C G A C G T A T G C G T C A A T G C
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.697
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.0 +/- 24.8bp
Average Position of motif in Background50.4 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTGACCACTAGGNGGC----
-TGGCCACCAGGGGGCGCTA
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC-----
-TGGCCACCAGGTGGCACTNT
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC-------
---GCCASCAGGGGGCGCYVNNG
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC
-TGACCYCT-------
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC
-GCACCCCTGGGTGCC
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
A C G T A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGACCACTAGGNGGC
NNNNTTGACCCCTNNNN---
 A C G T A C G T A C G T A C G T T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCACTAGGNGGC
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC
-TGACCTYA-------
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGACCACTAGGNGGC
-TGACCT---------
 T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTGACCACTAGGNGGC
TGTCGTGACCCCTTAAT---
 A C G T A C G T A C G T A C G T T A C G A C G T A T C G G T C A A T G C A G T C C G T A A T G C C A G T C T G A C T A G A C T G A C G T C T A G A T C G A G T C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T