Information for 8-CTSSGKGAGAAARCCW (Motif 9)

A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
Reverse Opposite:
G C A T A C T G A C T G A G T C A C G T A G C T G A C T A G T C G A C T G T A C G T C A A G T C A T G C T A G C C G T A A C T G
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 19.5bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTSSGKGAGAAARCCW
---CSTGGGAAAD---
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
-TTCGCGCGAAAA---
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTSSGKGAGAAARCCW
GAAAAGGTGTGAAAATT-
 A C G T A C G T A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTSSGKGAGAAARCCW
--TGGCGGGAAAHB--
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
--AGGTGTGAAA----
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
BTKGGCGGGAAA----
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTSSGKGAGAAARCCW
TTTGGCGGGAAA----
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
---GGCGGGAARN---
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
-AAGGTGTGAAAAT--
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTSSGKGAGAAARCCW
-AAGGTGTGAAA----
 A G T C A C G T A T C G A T C G A C T G C A G T A C T G C T G A C T A G C T G A T C G A C G T A C T A G A G T C A G T C C G T A
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T