Information for 5-TGCCCTCTGGTGG (Motif 6)

A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
Reverse Opposite:
A G T C G T A C C T G A A G T C G A T C C G T A A C T G C T G A C T A G A C T G A C T G A T G C C T G A
p-value:1e-12
log p-value:-2.963e+01
Information Content per bp:1.799
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.7 +/- 24.2bp
Average Position of motif in Background56.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----TGCCCTCTGGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.86
Offset:-6
Orientation:forward strand
Alignment:------TGCCCTCTGGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCTCTGGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTGGTGG
NTGCCCANNGGTNA
 A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCCCTCTGGTGG
-GCCATCTGTT--
 A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTGGTGG
NTGCCCTTGGGCGN
 A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTGGTGG
CTGACCTTTG----
 A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTGGTGG
NTGCCCTAGGGCAA
 A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCTGGTGG
ATGCCCTGAGGC--
 A C G T A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCCCTCTGGTGG
-ACCATCTGTT--
 A G C T A T C G G T A C A G T C A G T C A G C T A G T C A C G T C T A G T C A G A G C T A C T G C T A G
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T