Information for 5-GAAGCGTTTGRAA (Motif 7)

A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G C T A T G C C G T A C G T A C G T A A T G C A C T G A G T C A C G T C G A T A T G C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.778
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 28.4bp
Average Position of motif in Background43.5 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCGTTTGRAA
NGAAGC--------
 A C G T A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAAGCGTTTGRAA---
------TTTGAAACCG
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAAGCGTTTGRAA-
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAAGCGTTTGRAA
-AAGCTTG-----
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GAAGCGTTTGRAA
--ANCGTTTANN-
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GAAGCGTTTGRAA
NNNTTAGGTAGCNTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GAAGCGTTTGRAA--
------ATTTGAATT
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAAGCGTTTGRAA
-CAGCC-------
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAAGCGTTTGRAA-
GTGCCGTGTGCAAA
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GAAGCGTTTGRAA--
---GNCTATAAAAGG
 A T C G C G T A G T C A C T A G A G T C A T C G C G A T C G A T A C G T T A C G T C A G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G