Information for 13-TAAATTGGGATCATGC (Motif 22)

A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C G A T A C T G C G T A A G C T A T G C A G T C A G T C C T G A G T C A C G A T A C G T A C G T C G T A
p-value:1e-6
log p-value:-1.578e+01
Information Content per bp:1.890
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 28.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TAAATTGGGATCATGC
------NGGATTAN--
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TAAATTGGGATCATGC--
----TTGGCATGGTGCCA
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TAAATTGGGATCATGC
-AAATTAGCATAAT--
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TAAATTGGGATCATGC--
-GATGGGGTATCATTTTT
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TAAATTGGGATCATGC-
-AGAGCGGGGTCAAGTA
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAAATTGGGATCATGC--
-NTNNNGGGGTCANGNNN
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TAAATTGGGATCATGC
CAAATTCCGGAACC---
 A C G T A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TAAATTGGGATCATGC
--NNTTGGCANN----
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TAAATTGGGATCATGC--
-AATAGGGTATCATATAT
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TAAATTGGGATCATGC--
-AATGGGGTATCACGTTT
 A C G T C G T A C G T A C G T A A C G T A G C T C T A G A C T G A T C G C T G A C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T