Information for 8-AACGCAGACACAG (Motif 12)

T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
Reverse Opposite:
G T A C A C G T A T C G A G C T A C T G A G C T A G T C A G C T A C T G A G T C C A T G A G C T A C G T
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.666
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif95.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.8 +/- 19.2bp
Average Position of motif in Background49.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AACGCAGACACAG
-GCGCATGCGCAG
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AACGCAGACACAG
---CCAGACRSVB
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACGCAGACACAG
-GCGCATGCGCAC
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACGCAGACACAG
---CCAGACAG--
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AACGCAGACACAG
---CCAGGAACAG
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACGCAGACACAG
TGCGCAGGCGC--
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AACGCAGACACAG
---BCAGACWA--
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACGCAGACACAG
-ACGCCCACGCA-
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AACGCAGACACAG--
AGCGGCACACACGCAA
 A C G T T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AACGCAGACACAG-
--------CACAGN
 T C G A T C G A G A T C T A C G G T A C C T G A A C T G T C G A T A G C T C G A T A G C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C