Information for 6-CTGWGGAGGAATATTC (Motif 11)

A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C
Reverse Opposite:
T C A G C G T A C G T A A C G T G T C A A G C T A C G T G A T C A G T C C G A T A G T C G T A C C G T A A G T C G T C A A C T G
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 28.3bp
Average Position of motif in Background50.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGWGGAGGAATATTC-----
-------CTAATATTGCTAAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGWGGAGGAATATTC-----
-------CTAATATTGCTAAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGWGGAGGAATATTC
--GTGGAT--------
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTGWGGAGGAATATTC
------ATGAATATTC
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGWGGAGGAATATTC-----
-NNTTCTGGAANNTTCTAGAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CTGWGGAGGAATATTC-----
--------GAACGTTCTAGAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTGWGGAGGAATATTC-----
--------GAANNTTCTAGAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTGWGGAGGAATATTC-----
--------GAANGTTCTAGAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CTGWGGAGGAATATTC-----
------TAGAANVTTCTAGAA
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTGWGGAGGAATATTC-----
------ATGAATATTCATGAG
 A G T C C A G T A C T G C G A T A C T G A C T G C G T A T A C G C A T G C G T A C T G A A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G