Information for 2-CCGGGRGNHW (Motif 4)

A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
Reverse Opposite:
G C T A C A T G C G T A A G T C G A C T A G T C G A T C A G T C C T A G T A C G
p-value:1e-13
log p-value:-3.001e+01
Information Content per bp:1.473
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif23.35%
Number of Background Sequences with motif6736.6
Percentage of Background Sequences with motif14.09%
Average Position of motif in Targets50.8 +/- 27.7bp
Average Position of motif in Background50.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCGGGRGNHW
GGCGGGAARN-
 A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGRGNHW--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCGGGRGNHW
GGGCGGGAAGG-
 A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCGGGRGNHW
-TGGGGA---
 A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGGGRGNHW
GGGCGGGAAGG-
 A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGRGNHW-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCGGGRGNHW
--CGGAGC--
 A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGGGRGNHW
CTTCCNGGAA---
 A C G T A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CCGGGRGNHW
NCCCCCCCGGGGGGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CCGGGRGNHW
ACCCCCCCGGGGGGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C A G C A T G T C A G C T G A T C A G G C A T G T A C C G A T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T