Information for 2-ACAATGAAACAGG (Motif 2)

C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G A T A C G T A C G T A G T C C G T A A C G T A G C T A C T G A C G T
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.3 +/- 18.9bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGAAACAGG
GACAATGNN-----
 A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAATGAAACAGG-
CAGCATGACTCAGCA
 A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G A C G T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ACAATGAAACAGG
----TGACTCA--
 C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAATGAAACAGG---
---ATGCAACAGGTGG
 C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACAATGAAACAGG
AATGAACAATGGAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAATGAAACAGG
GAAATGACTCA--
 C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACAATGAAACAGG
--NATGAGTCANN
 C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACAATGAAACAGG
WNAGTCADAVTGAAACTN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAATGAAACAGG
AGGAGATGACTCAT-
 A C G T A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGAAACAGG
VRRACAAWGG------
 A C G T A C G T A C G T C G T A G T A C C T G A C G T A A C G T A C T G C G T A G T C A C G T A A G T C C G T A A C T G A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T