Information for 4-TTGGTAGCCC (Motif 13)

A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G C T A G A G T C A C G T C G T A G T A C A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.884
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.2 +/- 29.1bp
Average Position of motif in Background51.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC--
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC---
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC---
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTAGCCC-----
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC---
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC--
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTGGTAGCCC
CTATAATTGTTAGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC---
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTAGCCC---
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTAGCCC
NNTTGGCANN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C T A G A G T C G T A C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T