Information for 9-ATTTTTAAAA (Motif 12)

C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
Reverse Opposite:
A G C T C G A T A G C T C G A T C G T A G T C A C G T A C T G A G T C A G A C T
p-value:1e-5
log p-value:-1.254e+01
Information Content per bp:1.713
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif717.0
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets54.9 +/- 29.6bp
Average Position of motif in Background49.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTTTTAAAA-
AATATTAATAAAGA
 A C G T A C G T A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTAAAA
TCTATTTTTAGA-
 A C G T A C G T A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATTTTTAAAA
CGGTTTCAAA-
 A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTTTTAAAA
ATTGTTA---
 C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTTTTAAAA-
NTAATTAATAT
 C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTTAAAA-
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTAAAA---
NNNTTTNTAATACNG
 A C G T A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATTTTTAAAA
---ATTAAA-
 C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTTTAAAA
ATTGTTTAN-
 C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTAAAA
TCTATTTATAGN-
 A C G T A C G T A C G T C T G A A C G T A G C T G C A T A C G T C G A T C G T A T C G A G C T A T C G A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T