Information for 25-TCAGAATTGTGGT (Motif 31)

A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T
Reverse Opposite:
T G C A A G T C A G T C C G T A A T G C C G T A C G T A A C G T C G A T A T G C A C G T A C T G C T G A
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 16.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TCAGAATTGTGGT---
----NNHTGTGGTTWN
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCAGAATTGTGGT---
--AAAATTGTTATGAA
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TCAGAATTGTGGT---
------CTGTGGTTTN
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAGAATTGTGGT---
GGAAAAATTGTTAGGAA
 A C G T A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCAGAATTGTGGT--
-----TTTGCGGTTT
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCAGAATTGTGGT--
-----NNTGTGGTTT
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGAATTGTGGT----
-TTCAATTGTTCTAAAA
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCAGAATTGTGGT--
------TTGCGGTTT
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCAGAATTGTGGT--
-----GCTGTGGTTT
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGAATTGTGGT
-GGGAATTGTAGT
 A G C T A G T C C G T A A T C G C G T A C G T A A C G T A C G T A T C G A C G T A C T G C T A G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T