Information for 2-AGCHAVTSTTTGHTYT (Motif 3)

C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T
Reverse Opposite:
G C T A T C A G C T G A C G A T G A T C C G T A T C G A C G T A T A G C C T G A A C G T G C A T C G A T C A T G A G T C G C A T
p-value:1e-18
log p-value:-4.231e+01
Information Content per bp:1.572
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif612.8
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets48.6 +/- 23.3bp
Average Position of motif in Background50.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT--
---AACCCTTTGATCTTT
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT---
--NNNTCCTTTGTTCTNNN
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT---
--TNNTCCTTTGTTCTNNT
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGCHAVTSTTTGHTYT---
--AATCCCTTTGATCTATC
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.66
Offset:6
Orientation:forward strand
Alignment:AGCHAVTSTTTGHTYT
------CCTTTGTTTT
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT--
------CCTTTGATCTTT
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCHAVTSTTTGHTYT---
--ATTTCCTTTGATCTATA
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT
----TNCCTTTGATGT
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCHAVTSTTTGHTYT
---GAATGTTTGTTT-
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T
A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCHAVTSTTTGHTYT---
--NNTTCCTTTGATCTANA
 C G T A T C A G G A T C G C T A C G T A T G C A G A C T A T C G C G A T A G C T C G A T C T A G G C T A G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A