Information for 6-CTSCTGTCCMTKGYKC (Motif 28)

G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
Reverse Opposite:
T A C G T G A C C T G A T A G C G T C A T C G A A C T G C A T G A T C G G T C A A G T C C G T A A C T G A T C G T G C A C T A G
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.639
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif286.4
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets49.7 +/- 25.1bp
Average Position of motif in Background51.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTSCTGTCCMTKGYKC
--GCTGTG--------
 G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTSCTGTCCMTKGYKC----
GGCGCTGTCCATGGTGCTGAA
 A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTSCTGTCCMTKGYKC---
GGAGCTGTCCATGGTGCTGA
 A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTSCTGTCCMTKGYKC
--GCTGTCAA------
 G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTSCTGTCCMTKGYKC
---CTGTTCCTGG---
 G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTSCTGTCCMTKGYKC
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTSCTGTCCMTKGYKC
--CCTGTCAA------
 G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTSCTGTCCMTKGYKC
TGCAGCTGTCCCT-----
 A C G T A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTSCTGTCCMTKGYKC
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTSCTGTCCMTKGYKC
AAAGACCTGTCAATAC---
 A C G T A C G T A C G T G A T C A C G T A T G C A G T C C G A T C T A G C A G T T A G C G T A C G T A C A G C T C A G T A T C G G A C T A C T G A T G C
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T