Information for 22-CTGCAGGGCAAAT (Motif 27)

G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
Reverse Opposite:
G C T A A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 36.0bp
Average Position of motif in Background35.0 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGGCAAAT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGGGCAAAT
ATTTGCATAACAAAG
 A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGCAAAT----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGCAAAT----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGCAGGGCAAAT----
---TAGGGCAAAGGTCA
 G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCAGGGCAAAT----
--GTAGGGCAAAGGTCA
 G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGGCAAAT
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGGCAAAT
CACAGCAGGGGG---
 A C G T A C G T G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTGCAGGGCAAAT-
----AAAACAAAGG
 G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCAGGGCAAAT
WDNCTGGGCA---
 G T A C A C G T A C T G A G T C C G T A A C T G C T A G T A C G A G T C C G T A C G T A C G T A C A G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T