Information for 18-AACACAAAGGTCA (Motif 24)

G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
Reverse Opposite:
C A G T A C T G G C T A A G T C A G T C A C G T A C G T A C G T A T C G C G A T A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.768
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif66.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets43.9 +/- 25.0bp
Average Position of motif in Background55.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AACACAAAGGTCA
AAAACAAAGG---
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:AACACAAAGGTCA-
----CAAAGGTCAG
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AACACAAAGGTCA----
-TCTCAAAGGTCACGAG
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AACACAAAGGTCA----
-TCTCAAAGGTCACCTG
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AACACAAAGGTCA
-ANGNAAAGGTCA
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AACACAAAGGTCA
--AACAAAGG---
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AACACAAAGGTCA
--RACAAWGG---
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACACAAAGGTCA
VRRACAAWGG---
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AACACAAAGGTCA
---ACAAAG----
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AACACAAAGGTCA----
----CAAAGGTCAAGGG
 G T C A T G C A A G T C C G T A A T G C C G T A T G C A G T C A C T A G T A C G C G A T T G A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G