Information for 11-TGCAAGGTCAAAC (Motif 16)

C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C
Reverse Opposite:
T C A G A G C T A C G T A C G T T A C G C G T A T G A C A G T C A C G T A C G T A T C G A T G C C G T A
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.639
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif265.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets46.4 +/- 24.1bp
Average Position of motif in Background50.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCAAGGTCAAAC------
-GGAAAGCGAAACCAAAAC
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCAAGGTCAAAC
--CAAGGHCANV-
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCAAGGTCAAAC-
--GAAACTGAAACT
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCAAGGTCAAAC---
-GGAAANTGAAACTNA
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCAAGGTCAAAC--
TATTCAAGGTCATGCGA
 A C G T A C G T C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAAGGTCAAAC
-TCAAGGTCATA-
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCAAGGTCAAAC-
--GAAAGTGAAAGT
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCAAGGTCAAAC
-TCAAGGTCAN--
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCAAGGTCAAAC
-TCAAGGTCAT--
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCAAGGTCAAAC---
TGCCAAAATAAACANN
 C G A T T A C G T A G C T G C A T C G A T C A G A C T G G C A T A T G C C G T A T C G A C T G A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A