Information for 10-GGTAWYTCYCAAY (Motif 15)

A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T A T C G C T A G A C T G C G T A C T G A C G T A A C G T C T G A A G T C A G T C
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 10.6bp
Average Position of motif in Background53.6 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTAWYTCYCAAY
GGAAATTCCC---
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTAWYTCYCAAY
GGAAATTCCC---
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTAWYTCYCAAY
NGGGGATTTCCC---
 A C G T A C G T A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTAWYTCYCAAY
GGAAATCCCC---
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTAWYTCYCAAY
GGGGATTTCC----
 A C G T A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTAWYTCYCAAY-
NNNGTAATTACNNATA
 A C G T A C G T A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTAWYTCYCAAY
---ATTGCGCAAC
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGTAWYTCYCAAY
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

CEBPG/MA0838.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGTAWYTCYCAAY
---ATTGCGCAAT
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C
A C G T A C G T A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGTAWYTCYCAAY-
---ATTGCACAATA
 A C T G A C T G A G C T C G T A C G A T A G C T A C G T A G T C G A T C A T G C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A