Information for 9-KSCAAATKGCAAA (Motif 14)

A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C T G A G T C G T A C C G T A A C G T A C G T A C G T A C T G A T G C G T C A
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.899
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 29.5bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:KSCAAATKGCAAA-----
---CAATTGCAAAAATAT
 A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KSCAAATKGCAAA-
GAAAAAATTGCAAGG
 A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KSCAAATKGCAAA-
----NATGGAAAAN
 A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:KSCAAATKGCAAA-
----AATGGAAAAT
 A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----KSCAAATKGCAAA
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---KSCAAATKGCAAA
ATATGCAAAT------
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:KSCAAATKGCAAA---
-AAAAATAACAAACGG
 A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----KSCAAATKGCAAA
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---KSCAAATKGCAAA
TTATGCAAAT------
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:KSCAAATKGCAAA---
-----ATTGCACAATA
 A C G T A T C G A G T C C G T A C G T A C G T A C G A T A C T G A C T G A G T C C G T A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A