Information for 7-GCTAACTCAACAG (Motif 9)

A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G A T A C G T T C A G C G T A A C T G A C G T A C G T C G T A T A C G A T G C
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.802
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 30.3bp
Average Position of motif in Background45.8 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTAACTCAACAG
GCTGASTCAGCA-
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTAACTCAACAG
NCTAAGTAAACA-
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTAACTCAACAG----
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTAACTCAACAG
--AAAGTAAACA-
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTAACTCAACAG--
NCWRWGTAAACANSV
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

MAFG/MA0659.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCTAACTCAACAG---
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTAACTCAACAG
--AAAGTAAACA-
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTAACTCAACAG
ACTTAGTTAACTAAAAA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTAACTCAACAG
CCTTAGTTAACTAAAAT-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTAACTCAACAG-
--TATGTAAACANG
 A T C G A G T C C G A T C G T A C G T A A G T C A C G T A G T C G T C A C G T A T A G C C G T A A C T G A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G