Information for 2-AGGSCACATGGCH (Motif 3)

G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
Reverse Opposite:
C T A G T A C G T G A C G T A C G T C A A G C T A C T G A C G T A C T G A T G C G A T C G A T C C G A T
p-value:1e-32
log p-value:-7.423e+01
Information Content per bp:1.590
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif17.10%
Number of Background Sequences with motif2600.3
Percentage of Background Sequences with motif5.56%
Average Position of motif in Targets55.6 +/- 25.4bp
Average Position of motif in Background50.7 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:AGGSCACATGGCH
-AAGCACATGG--
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:AGGSCACATGGCH
NNACCACGTGGT-
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:AGGSCACATGGCH
-NNCCACGTGG--
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AGGSCACATGGCH
-NNCCACGTGG--
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGGSCACATGGCH
-GGTCACATGAC-
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AGGSCACATGGCH
--GTCACGTGGM-
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:AGGSCACATGGCH
--GGCACGTGTC-
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AGGSCACATGGCH
--GCCACGTG---
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AGGSCACATGGCH
--GNCACGTG---
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:AGGSCACATGGCH
--NNCACGTGGT-
 G C T A C T A G C T A G T A C G G T A C C G T A G T A C T C G A A C G T A C T G A C T G A T G C G A T C
A C G T A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T