Information for 16-AGTTCTAGGGTCA (Motif 23)

C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
Reverse Opposite:
A C G T A C T G C G T A A G T C G T A C A G T C G C A T C G T A A T C G T G C A T C G A A G T C G A C T
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.671
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif178.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets44.3 +/- 23.1bp
Average Position of motif in Background47.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTAGGGTCA
GAGGTCAAAGGTCA
 A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTAGGGTCA
GGGGTCAAAGGTCA
 A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTAGGGTCA
GGGGTCAAAGGTCA
 A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTAGGGTCA
GGGGTCAAAGGTCA
 A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTAGGGTCA
GAGGTCAAAGGTCA
 A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGTTCTAGGGTCA--
AAAGGTCAAAGGTCAAC
 A C G T A C G T C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.67
Offset:7
Orientation:forward strand
Alignment:AGTTCTAGGGTCA
-------AGGTCA
 C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTTCTAGGGTCA-----
-NTNNNGGGGTCANGNNN
 C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTTCTAGGGTCA-----
-CTCCAGGGGTCAATTGA
 C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGTTCTAGGGTCA----
----CAAAGGTCAAGGG
 C T G A C T A G A G C T A C G T A T G C G C A T C G T A T A C G A C T G A C T G G A C T T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G