Information for 8-GCACAGCTCTCTGGGM (Motif 22)

A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A
Reverse Opposite:
C A G T A T G C A G T C A G T C C G T A A T C G C T G A C A T G C T G A A T C G A G T C G A C T C T A G A C G T A C T G A T G C
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.749
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.7 +/- 21.6bp
Average Position of motif in Background55.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCACAGCTCTCTGGGM---
----RGSMTBCTGGGAAAT
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GCACAGCTCTCTGGGM-
-------WDNCTGGGCA
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GCACAGCTCTCTGGGM-
-------GGTCTGGCAT
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCACAGCTCTCTGGGM
----VBSYGTCTGG--
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCACAGCTCTCTGGGM
------CTGTCTGG--
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCACAGCTCTCTGGGM--
-CCNNACCATCTGGCCTN
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCACAGCTCTCTGGGM---
--NNTNNTGTCTGGNNTNG
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCACAGCTCTCTGGGM--
------TCCCCTGGGGAC
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCACAGCTCTCTGGGM--
--GTAGGTCACTGGGTCA
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCACAGCTCTCTGGGM-
-CAATGCATTGTGGGTA
 A T C G A G T C T G C A G A T C C T G A A C T G A T G C A G C T G A T C A G C T A T G C A C G T A C T G A C T G A T C G G T C A A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A