Information for 11-CAAAGTAAACAAA (Motif 17)

T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A
Reverse Opposite:
G A C T A C G T A C G T C A T G A G C T A C G T A C G T G T C A A G T C G C A T G A C T C A G T A C T G
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.754
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif211.1
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets44.0 +/- 27.6bp
Average Position of motif in Background49.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA-
CAAAAGTAAACAAAG
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA---
AAAAAGTAAACAAAGAC
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA---
AAAAAGTAAACAAACAC
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA---
AAAAAGTAAACAAACAC
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CAAAGTAAACAAA----
-AAAGTAAACAAAAATT
 T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA---
AAAATGTAAACAAACAG
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTAAACAAA---
AAAATGTAAACAAACAG
 A C G T T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.86
Offset:1
Orientation:forward strand
Alignment:CAAAGTAAACAAA
-TAAGTAAACAAA
 T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.86
Offset:1
Orientation:forward strand
Alignment:CAAAGTAAACAAA
-AAAGTAAACA--
 T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.86
Offset:1
Orientation:forward strand
Alignment:CAAAGTAAACAAA
-AAAGTAAACA--
 T A G C G T C A C G T A C G T A T A C G A C G T C G T A G T C A C T G A G A T C C G T A T G C A C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T