Information for 12-TYATTGATCT (Motif 13)

G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T
Reverse Opposite:
C T G A C T A G T C G A C A G T T G A C C G T A T C G A C G A T C T A G C G T A
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.553
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif575.6
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets48.3 +/- 25.8bp
Average Position of motif in Background49.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TYATTGATCT--
--ATTGATTYND
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TYATTGATCT
NTATYGATCH
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TYATTGATCT--
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TYATTGATCT--
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TYATTGATCT
----TGACCT
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TYATTGATCT-
---GTGACCTT
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TYATTGATCT--
----TGACCYCT
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TYATTGATCT--
----TGACCTYA
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TYATTGATCT----
----TGACCTTGAT
 G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TYATTGATCT---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T G C A T G A T C G C T A A G C T G C A T A C T G G T C A A G C T G A T C G A C T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C