Information for 14-AGGCCAAGGG (Motif 24)

C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
Reverse Opposite:
G T A C G T A C A G T C A G C T A C G T A C T G A C T G A G T C G T A C A G C T
p-value:1e-6
log p-value:-1.492e+01
Information Content per bp:1.826
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif265.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets48.0 +/- 23.3bp
Average Position of motif in Background53.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAAGGG---
CAGGCCNNGGCCNN
 A C G T C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGGG--
AGGTCAAGGTCA
 C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGGG
AGGCCTAG--
 C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGGG--
AGGTCAAGGTCA
 C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGCCAAGGG
AGGCCTNG--
 C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGCCAAGGG---
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGCCAAGGG
-TGCCAA---
 C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAAGGG
CGTGCCAAG--
 A C G T C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAAGGG---
TAGGGCAAAGGTCA
 A C G T C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGCCAAGGG
CAAAGGTCAAGGG
 A C G T A C G T A C G T C T G A C A T G A C T G G T A C G T A C T G C A C T G A C T A G C A T G C A T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G