Information for 9-TWCCCGGGAG (Motif 16)

C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G
Reverse Opposite:
A T G C C G A T A T G C T A G C T A G C T A C G C T A G A T C G C G T A G T C A
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.667
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif166.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets54.6 +/- 23.1bp
Average Position of motif in Background53.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TWCCCGGGAG
TTCCNGGAAG
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TWCCCGGGAG---
-TCCCNNGGGACN
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T A C G T
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

ELF4/MA0641.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TWCCCGGGAG--
AACCCGGAAGTG
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

ELF1/MA0473.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TWCCCGGGAG--
AACCCGGAAGTG
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G

ELF3/MA0640.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TWCCCGGGAG---
AACCCGGAAGTAA
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T A C G T
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TWCCCGGGAG
TTTCCCAGAAN
 A C G T C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

EHF/MA0598.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TWCCCGGGAG--
AACCCGGAAGTA
 C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TWCCCGGGAG----
NNNACCGAGAGTNNN
 A C G T C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TWCCCGGGAG-
NNCTTCCNGGAAGN
 A C G T A C G T A C G T C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TWCCCGGGAG---
ANTCCCTNGGGAAT
 A C G T C A G T C G A T A T G C A G T C A T G C A T C G A C T G A T C G G C T A A T C G A C G T A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T