Information for 8-GGTGTCAGTGACC (Motif 11)

A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A G T C A C G T A T C G G T C A A G T C C G T A A G T C A T G C
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 28.9bp
Average Position of motif in Background59.8 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGTGTCAGTGACC--
-AGGTCANTGACCTN
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTGTCAGTGACC-
--RGTTAGTGCCCY
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTCAGTGACC-
AGGNCANNGTGACCT
 A C G T A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGTCAGTGACC--
AAGGTCACGGTGACCTG
 A C G T A C G T A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GGTGTCAGTGACC-
--------TGACCT
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PPARG/MA0066.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGTGTCAGTGACC---
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C G T A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTGTCAGTGACC--
GGTCANNGTGACCTN
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GGTGTCAGTGACC--
-------GTGACCTT
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GGTGTCAGTGACC---
--------TGACCYCT
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGTCAGTGACC-
--GGTTAGAGACCT
 A T C G C T A G C G A T A C T G A C G T A T G C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T