Information for 15-GCCTTTAGTGCAC (Motif 22)

A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
Reverse Opposite:
A C T G A C G T A T C G A G T C C G T A A G T C C G A T C G T A C T G A C G T A A T C G A C T G A T G C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 25.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTTAGTGCAC
TGCCCTNAGGGCA-
 A C G T A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCTTTAGTGCAC
--BTBRAGTGSN-
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCTTTAGTGCAC-----
-NTNTATGTGCACATNNN
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCTTTAGTGCAC------
--CAGATGTGCACATACGT
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCTTTAGTGCAC
--CTYRAGTGSY-
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTTTAGTGCAC
---TTGAGTGSTT
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTTTAGTGCAC
TGCCCTGAGGGCA-
 A C G T A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTTTAGTGCAC
TGCCCTGAGGGCA-
 A C G T A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCTTTAGTGCAC
--CTTGAGTGGCT
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCCTTTAGTGCAC
---TTAAGTGC--
 A T C G A G T C A T G C A C G T A G C T A C G T C G T A A C T G A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T