Information for 10-AGGTCACTGA (Motif 15)

C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
Reverse Opposite:
A C G T T G A C C G T A T A C G G A C T T A C G G T C A T G A C G T A C G A C T
p-value:1e-12
log p-value:-2.844e+01
Information Content per bp:1.616
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif473.6
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets51.5 +/- 25.0bp
Average Position of motif in Background51.2 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCACTGA---
NAGGTCANTGACCT
 A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGTCACTGA--
AGGTCTCTAACC
 C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACTGA
AAGGTCAC---
 A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACTGA----
GTAGGTCACTGGGTCA
 A C G T A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTCACTGA
AGGTCA----
 C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACTGA
TRAGGTCA----
 A C G T A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCACTGA
TCAAGGTCAN---
 A C G T A C G T A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTCACTGA--
RGGGCACTAACY
 C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGTCACTGA
ATCAAGGTCA----
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACTGA
AGRGGTCA----
 A C G T A C G T C T G A A C T G A C T G C A G T A T G C C T G A A T G C A C G T A C T G T G C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T