Information for 8-AATTTGGCWG (Motif 13)

T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
Reverse Opposite:
T A G C C G A T A T C G A T G C A T G C C G T A C T G A C T G A C A G T A C G T
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.699
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.06%
Number of Background Sequences with motif1059.8
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets49.5 +/- 28.8bp
Average Position of motif in Background50.1 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AATTTGGCWG-
--NTTGGCANN
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.82
Offset:3
Orientation:forward strand
Alignment:AATTTGGCWG
---TTGGCA-
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AATTTGGCWG-
-NNTTGGCANN
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AATTTGGCWG
--CTTGGCAA
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------AATTTGGCWG
NNTGTTTATTTTGGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATTTGGCWG-
CAAGATGGCGGC
 A C G T T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AATTTGGCWG-
---TTGACAGC
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATTTGGCWG
-GGTTGGCAT
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATTTGGCWG
-ARNTGACA-
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATTTGGCWG-----
-TTTTGGCGGGAAAA
 T G C A G T C A G A C T A G C T A C G T A T C G T A C G A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A