Information for 7-AGGCTTTGTTTGC (Motif 10)

C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A G T A C C G T A C G T A C G T A A T C G A G T C A G T C G A C T
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 19.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
---CTTTGTTTACTTTTN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxj3/MA0851.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
-NNNTTTGTTTACNTTNN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
-NNNTTTGTTTACNTTNN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTTTGC
--CCTTTGTTTT-
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC---
NNNNTTTGTTTACNNT
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
-NNNTTTGTTTACTTTTN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
-NNNTTTGTTTACATTTN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGCTTTGTTTGC-----
-NNNTTTGTTTACATTTN
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTTTGC
--CCWTTGTYYB-
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTTTGC----
--CCATTGTATGCAAAT
 C G T A A C T G C T A G A T G C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T