Information for 9-TGSTCACRTG (Motif 13)

C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G
Reverse Opposite:
A G T C G T C A A G C T A C T G A C G T A C T G G T C A A T G C G A T C C G T A
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.772
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif793.0
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets56.3 +/- 24.9bp
Average Position of motif in Background49.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:TGSTCACRTG--
-GGTCACATGAC
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TGSTCACRTG--
-GGTCACGTGGC
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:TGSTCACRTG--
--GTCACGTGGM
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TGSTCACRTG--
--GTCACGTGGT
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TGSTCACRTG-
-GGTCACGTGA
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TGSTCACRTG-
-GGTCACGTGC
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TGSTCACRTG-
-NGKCACGTGM
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T
A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.84
Offset:2
Orientation:forward strand
Alignment:TGSTCACRTG
--GNCACGTG
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.84
Offset:2
Orientation:forward strand
Alignment:TGSTCACRTG
--GHCACGTG
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TGSTCACRTG--
--GTCACGTGNT
 C G A T C T A G T A C G C A G T A G T C C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T