Information for 7-GCCCTCKGCTGCC (Motif 6)

A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C G T C A A C T G A T G C G T A C C T A G C T G A A C T G A C T G A C T G A G T C
p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 24.3bp
Average Position of motif in Background37.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCKGCTGCC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCKGCTGCC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCKGCTGCC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCKGCTGCC-
TGWCCTCARNTGACC
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCKGCTGCC
CGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCKGCTGCC
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCKGCTGCC
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCKGCTGCC-
GACCCCCCGCTGCGC
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCKGCTGCC
GACCCCCCGCTGTG
 A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCKGCTGCC
CTGACCTTTG-----
 A C G T A C G T A C T G A G T C A G T C A G T C A G C T A G T C A C T G A T C G A G T C C A G T A T C G A T G C A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T