Information for 16-ACAYAGRTCACAT (Motif 14)

G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T
Reverse Opposite:
C G T A A G C T C T A G A C G T A C T G T G C A A G C T A G T C C G A T T C A G A C G T A C T G C A G T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.673
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif168.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets48.0 +/- 24.0bp
Average Position of motif in Background48.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACAYAGRTCACAT-
TCTCAAAGGTCACCTG
 A C G T A C G T G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACAYAGRTCACAT-
TCTCAAAGGTCACGAG
 A C G T A C G T G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAYAGRTCACAT
-CAAAGGTCAG--
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACAYAGRTCACAT---
-----GGTCACGTGGC
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACAYAGRTCACAT---
-----GGTCACATGAC
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAYAGRTCACAT
ACAAAG-------
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACAYAGRTCACAT-----
NNNNNBAGATAWYATCTVHN
 A C G T A C G T G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAYAGRTCACAT
ACAAAGGNBCCT-
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACAYAGRTCACAT-
-CAAAGGTCAAGGG
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAYAGRTCACAT
----AGATAASR-
 G T C A G T A C C G T A A G T C C G T A A C T G C T G A A C G T T G A C T G C A A G T C C T G A C G A T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T