Information for 3-AGTYCAAAGKBCA (Motif 3)

C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
Reverse Opposite:
A C G T C T A G T C A G T G C A G T A C C G A T A G C T A C G T C T A G C T A G G T C A G T A C G A C T
p-value:1e-42
log p-value:-9.787e+01
Information Content per bp:1.658
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.83%
Number of Background Sequences with motif618.5
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets50.7 +/- 25.1bp
Average Position of motif in Background50.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--AGTYCAAAGKBCA
AGAGTCCAAAGTCCA
 A C G T A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---AGTYCAAAGKBCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.84
Offset:4
Orientation:forward strand
Alignment:AGTYCAAAGKBCA-
----CAAAGGTCAG
 C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA--
GGGGTCAAAGTCCAAT
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA
TAGGGCAAAGGTCA
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA
GAGGTCAAAGGTCA
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA
GAGGTCAAAGGTCA
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA
GGGGTCAAAGGTCA
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AGTYCAAAGKBCA
GTAGGGCAAAGGTCA
 A C G T A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AGTYCAAAGKBCA
GGGGTCAAAGGTCA
 A C G T C T G A C A T G C A G T A G T C G A T C C G T A C T G A C G T A C A T G A C G T A G T C G A T C G T C A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A