Information for 6-TCTGGCCTCT (Motif 4)

A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
Reverse Opposite:
C G T A T A C G C G T A A T C G C A T G A G T C G A T C C G T A A C T G T G C A
p-value:1e-21
log p-value:-4.928e+01
Information Content per bp:1.650
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif2296.2
Percentage of Background Sequences with motif4.96%
Average Position of motif in Targets48.8 +/- 25.1bp
Average Position of motif in Background50.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCCTCT
GGTCTGGCAT--
 A C G T A C G T A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCTGGCCTCT-
-CTGACCTTTG
 A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTGGCCTCT
--TGACCTYA
 A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCTGGCCTCT
--TGACCYCT
 A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGCCTCT-
WCATTTTGKCCTCYT
 A C G T A C G T A C G T A C G T A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTGGCCTCT
CNAGGCCT--
 A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCCTCT-
CNNTTGACCTTTG
 A C G T A C G T A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTGGCCTCT
-GTGACCTT-
 A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCCTCT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGCCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T T G A C G C A T C T A G T C A G G T A C T A G C G C A T A T G C G C A T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C