Information for 10-AATAAAGATTGCT (Motif 10)

C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C G T C A C G T A A C G T A T G C A C G T A C G T A C G T T G C A A C G T A C G T
p-value:1e-13
log p-value:-3.008e+01
Information Content per bp:1.931
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 33.8bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATAAAGATTGCT
AATAAACAATN--
 C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AATAAAGATTGCT--
---CAAGATGGCGGC
 C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATAAAGATTGCT
CCAATAAAAA-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATAAAGATTGCT
AAATAAACA-----
 A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATAAAGATTGCT
AAACAAACATTC--
 A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAGATTGCT
AACCCAATAAAATTCG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATAAAGATTGCT---
-GAAAAAATTGCAAGG
 C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATAAAGATTGCT
GCAATAAAA------
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATAAAGATTGCT
GGTAATAAAAA-----
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATAAAGATTGCT
CCAATAAAAA-----
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A A T C G C G T A A C G T A C G T A C T G A G T C C G A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T