Information for 8-CCCTCTGCTGTCT (Motif 7)

A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
Reverse Opposite:
C T G A A T C G T C G A T A G C T C G A T A C G T A G C G T C A T A C G C T G A A C T G T A C G A T C G
p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.754
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif64.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets57.4 +/- 22.1bp
Average Position of motif in Background46.8 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTGCTGTCT
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTGCTGTCT-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCTCTGCTGTCT
CCCCCTGCTGTG-
 A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGCTGTCT
GACCCCCCGCTGTG-
 A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTGCTGTCT-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGCTGTCT
GACCCCCCGCTGCGC
 A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGCTGTCT
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCCTCTGCTGTCT--
-----TGCTGACTCA
 A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGCTGTCT
GACCCCCCGCTGTGC
 A C G T A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGCTGTCT
GCCATCTGTT----
 A C G T A T G C A G T C G T A C A G C T A T G C A C G T A T C G A G T C A G C T A C T G A G C T A T G C G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T