Information for 12-GAGGCGGTAAGGC (Motif 20)

A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A C G T A C G T C G T A A T G C A T G C A C T G A G T C A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.8 +/- 19.2bp
Average Position of motif in Background29.1 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
CWGGCGGGAA---
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
-GGGCGGGAAGG-
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
-GGGCGGGAAGG-
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
--GGCGGGAARN-
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
--GGCGGGAAAH-
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGCGGTAAGGC
BTKGGCGGGAAA--
 A C G T A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGCGGTAAGGC
-TGGCGGGAAAHB
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGGCGGTAAGGC
--GGCVGTTR---
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGCGGTAAGGC
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGGCGGTAAGGC-
---CAGGTAAGTAT
 A C T G C G T A A C T G C T A G A G T C T A C G A T C G A C G T C G T A C G T A A C T G A T C G A G T C A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T