Information for 6-GGCACGTTGC (Motif 17)

C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C G T C A C T G A T A G C A C T G C G A T A C T G G A T C G T A C
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.855
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif56.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets44.3 +/- 25.2bp
Average Position of motif in Background51.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEY2/MA0649.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTGC
GGCACGTGNC
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGCACGTTGC-
-GCACGTACCC
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGCACGTTGC
--CACGTGGC
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGCACGTTGC-
TGGCACGTGCCG
 A C G T C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTGC
GTCACGTGGM
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTGC
-GCACGTAY-
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTGC
GGCACGTGTC
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTGC
-GCACGTNC-
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTGC
-ACACGTGGC
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTGC
BGCACGTA--
 C A T G C T A G A G T C C G T A A G T C A T C G A G C T A C G T A C T G A T G C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T