Information for 2-CAGCTGCCGCCCG (Motif 4)

A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
Reverse Opposite:
A G T C A C T G A C T G A C T G G T A C A C T G A C T G A T G C C T G A A C T G A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.843
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif94.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.8 +/- 25.0bp
Average Position of motif in Background51.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CAGCTGCCGCCCG
--GGTCCCGCCC-
 A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCGCCCG
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCGCCCG
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCCGCCCG
NCAGCTGCTG----
 A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCCGCCCG
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCGCCCG
AGCAGCTGCT-----
 A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTGCCGCCCG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCCGCCCG
NNACAGCTGC------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCGCCCG
AACAGCTGCAG----
 A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCCGCCCG
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A A C T G A G T C G A C T T A C G A G T C A G T C A C T G A G T C A G T C T G A C T C A G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T