Information for 1-GTSGCACASAGCS (Motif 2)

A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C G T A T C G A G C T A C T G A C G T A T C G A G T C A T G C C T G A A G T C
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.802
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif42.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.9 +/- 30.0bp
Average Position of motif in Background44.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTSGCACASAGCS-
GCCGCGCAGTGCGT
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:8
Orientation:forward strand
Alignment:GTSGCACASAGCS
--------CAGCC
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTSGCACASAGCS--
-TGGCACCATGCCAA
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GTSGCACASAGCS
------CACAGN-
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTSGCACASAGCS
------CGGAGC-
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTSGCACASAGCS---
TTGGCANNNTGCCAAG
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTSGCACASAGCS--
-TGGCAGNCTGCCAG
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTSGCACASAGCS--
AGCGGCACACACGCAA
 A C G T A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTSGCACASAGCS--
CGAAGCACACAAAATA
 A C G T A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTSGCACASAGCS
GTGGGCCCCA---
 A C T G A G C T A T C G A C T G A T G C T G C A A G T C C T G A A T G C C G T A A C T G A G T C A T G C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T