Information for 3-GCTCCTTCCTTGMCGC (Motif 9)

A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
Reverse Opposite:
T A C G T G A C A C T G A C T G G T A C G T C A C T G A T A C G A C T G G T C A T C G A C T A G A C T G G T C A A T C G A T G C
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.710
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.4 +/- 27.1bp
Average Position of motif in Background61.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTCCTTCCTTGMCGC
GCTCCG----------
 A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCTTCCTTGMCGC
CAGCTGTTTCCT------
 A C G T A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTTCCTTGMCGC
NGCTN------------
 A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCTCCTTCCTTGMCGC
AGATGCTRCTRCCHT-----
 A C G T A C G T A C G T A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTTCCTTGMCGC
NCTTCCCGCCC------
 A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTCCTTCCTTGMCGC
-NNNTTTCCTGGAAA-
 A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCTCCTTCCTTGMCGC
CNGTCCTCCC----------
 A C G T A C G T A C G T A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCTCCTTCCTTGMCGC
GGTCCCGCCC------
 A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTTCCTTGMCGC
GGCTCYAKCAYC-----
 A C G T A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTCCTTCCTTGMCGC
GCTTCC----------
 A T C G A T G C A C G T T A G C A G T C A C G T C A G T A G T C A T G C A G C T C A G T A C T G G T A C G T A C A C T G A T G C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T