Information for 12-TGGTCACCGAGCC (Motif 16)

A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.650e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.8 +/- 29.8bp
Average Position of motif in Background63.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGTCACCGAGCC--
AGGTCACCCTGACCT
 A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGTCACCGAGCC---
-GGTCANNGTGACCTN
 A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGGTCACCGAGCC
-----AGCGCGCC
 A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGTCACCGAGCC-
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCACCGAGCC---
CAGGTCACCGTGACCTT
 A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCACCGAGCC
NAGGTCANTGACCT
 A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGTCACCGAGCC
AGGTCA-------
 A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGTCACCGAGCC
-GRTGMTRGAGCC
 A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCACCGAGCC-----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGTCACCGAGCC
GARTGGTCATCGCCC-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A A C T G A G T C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T