Information for 10-GTAGCCTCCCAGC (Motif 10)

A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C T G A C T G A G T C G A C T C T G A A G T C
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 33.8bp
Average Position of motif in Background32.0 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTAGCCTCCCAGC--
ANNTNCCCACCCANNAC
 A C G T A C G T A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAGCCTCCCAGC
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTAGCCTCCCAGC------
----CCACACAGCAGGAGA
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTAGCCTCCCAGC------
----CCACACAGCAGGAGA
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGCCTCCCAGC-
TGTTKCCTAGCAACM
 A C G T A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTAGCCTCCCAGC--
-----TGCCCAGNHW
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GTAGCCTCCCAGC-
---------CAGCC
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTAGCCTCCCAGC-----
---ATTTCCCAGVAKSCY
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTAGCCTCCCAGC
--AGCCACTCAAG
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GTAGCCTCCCAGC
-------CACAGN
 A C T G A G C T C G T A A C T G A G T C A G T C C G A T A G T C A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C