Information for 10-AGAGGAAACTGCA (Motif 14)

C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
Reverse Opposite:
A C G T A C T G A G T C C T G A A T C G A G C T A G C T G A C T A T G C A G T C G A C T A T G C C G A T
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.769
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.3 +/- 18.2bp
Average Position of motif in Background45.8 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAGGAAACTGCA
AGAGGAA------
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGAGGAAACTGCA
GAGAACCGAAACTG--
 A C G T A C G T A C G T C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGGAAACTGCA
AATGGAAAAT---
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGAGGAAACTGCA-
-----AAACCGCAA
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGGAAACTGCA-----
-AATCGCACTGCATTCCG
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGAGGAAACTGCA
---GGAAATTCCC
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAAACTGCA
NACAGGAAAT----
 A C G T C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGAGGAAACTGCA--
-----AAACCGCAAA
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGGAAACTGCA
AATGGAAAAT---
 C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAAACTGCA
NACAGGAAAT----
 A C G T C G T A A T C G C G T A A C T G A T C G C G T A C T G A C T G A A T G C G A C T C T A G G T A C G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T