Information for 5-GCCATCTGCT (Motif 7)

A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T
Reverse Opposite:
C T G A A C T G A G T C C G T A A C T G G T C A A C G T A T C G C T A G A G T C
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.853
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif180.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets55.2 +/- 23.6bp
Average Position of motif in Background49.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
GCCATCTGTT
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
ACCATCTGTT
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGCT--
GCCAGCTGBTNB
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
RCCATMTGTT
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTGCT---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGCT--
NVCAGCTGBBNN
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCATCTGCT
--CAGCTGNT
 A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCCATCTGCT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCATCTGCT-
SNGCACCTGCHS
 A C G T A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------GCCATCTGCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T C A C A G T A G T C A C G T A C T G G T A C G A C T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C