Information for 14-CAAAGGCGCGGCC (Motif 16)

A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A T G C A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.836e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 32.5bp
Average Position of motif in Background59.8 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CAAAGGCGCGGCC--
CAAAGGCGTGGCCAG
 A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAAAGGCGCGGCC-
ATAAGGGCGCGCGAT
 A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAAAGGCGCGGCC-
ATAAAGGCGCGCGAT
 A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGCGCGGCC
AACAAAGG-------
 A C G T A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGCGCGGCC
NANAAGGGCGTGGTC
 A C G T A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAAAGGCGCGGCC
----GGCGCGCT-
 A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGCGCGGCC
RACAAWGG-------
 A C G T A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAAGGCGCGGCC
--DGGGYGKGGC-
 A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAAGGCGCGGCC
-GGGGGCGGGGCC
 A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGGCGCGGCC--
NNAGGGGCGGGGTNNA
 A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G G T A C A T C G A C T G A G T C A T G C A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A